ORT private data - Sequencing new samples


ORT will work with its collaborators to locate the requested samples. 


The following are a couple of examples for a request description:

  • Bulk RNA samples expression values of  Melanoma patients before treatment.

  • Clinical data and expression values of AL amyloidosis at diagnosis time.

*Price might be adjusted

ORT private data - Sequencing new samples

Calculate transcript expression (TPM)?
  • Technical process

    1. ORT will contact its collaborators to retrieve the requested samples based on your request criteria.

    2. The samples will be sequenced. The FASTQ files will be shared with you on a shared drive. 

    3. The clinical information output will be provided in a comma separated file (CSV) format that can be viewed with Microsoft Excel, Google sheet, Apple numbers or any other text editor.

    FASTQ (raw sequence) file will be shared with you on a shared drive. If you want us to calculate the expression, please check the "Calculate transcript expression" option.

    An example of clinical data sample is available in this link